We received 136 paper submissions and 14 poster submissions. The acceptance rate for regular papers is 28%. In addition to 37 regular papers, 30 manuscripts have been accepted as short papers and 29 submissions will be presented as posters.

Accepted Short Papers

• "Gene Set Analysis Using Principal Components", Isa Kemal Pakatci, Chapel Hill, Wei Wang, and Leonard McMillan
• "An Improved 1.375-Approximation Algorithm for the Transposition Distance Problem", Ulisses Dias, and Zanoni Dias
• "Spectrally resolved bioluminescence tomography with Huber-Markov random-field regularization", Kebin Jia, and Jinchao Feng
• "A Novel Network Model for Molecular Prognosis", Nancy Guo, Swetha Bose, and Ying-Wooi Wan
• "A Graph and Hierarchical Clustering based Approach for Population Structure Inference", Jun Wang, and Mao-zu Guo
• "Modeling the Competitive Effects of Nucleosomes on Transcription Factors Binding", Qian Xiang
• "A Wireless EEG Monitor System based on BSN node", Gang Li, Haifeng Chen, and Jungtae Lee
• "Feature Selection for Semi-Supervised Multi-Label Learning with Application to Gene Function Analysis", Guo-Zheng Li, Lei Ge, Mingyu You, Jack Yang, and Mary Yang
• "Enhanced flux balance analysis to model metabolic networks", Nishanth Nair, Navin Goyal, and Nagasuma Chandra
• "Shape Analysis and Classification of lgl-Type and Wild-Type Neurons", Jinane Mounsef, Lina Karam, Patricia Estes, and Daniela Zarnescu
• "An algorithm for discovering overlapping modules in proteomic networks", Alex Pothen, Chris Osgood, and Emad Ramadan
• "Semantic Classification and Dependency Parsing enabled Automated Bio-Molecular Event Extraction from Text", S. Toufeeq Ahmed, Radhika Nair, chintan Patel, Sheela Kanwar, Jorg Hakenberg, and Hasan Davulcu
• "Examining Effects of Variability on Systems Biology Modeling Algorithms", David John, Rachel Black, Jacquelyn Fetrow, and James Norris
• "SNP Specific Extraction and Analysis using Shrunken Dissimilarity Measure", Yang Liu, and Michael K. Ng
• "An Effective Filtering Gene Selection Method for Microarray Data via Shuffling and Statistical Analysis", Zejin Ding, and Yan-Qing Zhang
• "Improved protein structural class prediction based on chaos game representation", Mohammad Olyaee
• "DomMat: a method for predicting membrane protein types", Nazar Zaki
• "DNA Sequence Feature Selection for Intrinsic Nucleosome Positioning Signals Using AdaBoost", Yu Zhang, Xiuwen Liu, Justin Fincher, and Jonathan Dennis
• "An Integrated Approach to Predictive Genomic Analytics", Jason McDermott, Antonio Sanfilippo, Ronald Taylor, Bob Baddeley, Rick Riensche, and Russell Jensen
• "Comparison of discrete- and continuous-state stochastic methods to model neuronal signal transduction", Tiina Manninen, and Daniel Keller
• "An intelligent data-centric approach toward identification of conserved motifs in protein sequences", Kathryn Dempsey
• "Parallel Computation and Interactive Visualization of Time-varying Solvent Excluded Surfaces", Michael Krone, Carsten Dachsbacher, and Thomas Ertl
• "Using Fourier Phase Analysis on Genomic Sequences to Identify Retroviruses", Wendy Ashlock, and Suprakash Datta
• "Effects of cDNA microarray time-series data size on gene regulatory network inference accuracy", Vijender Chaitankar, Preetam Ghosh, Chaoyang Zhang, Edward Perkins, and Ping Gong
• "Compositional modelling of signalling pathways in Timed Concurrent Constraint Programming", Davide Chiarugi, Moreno Falaschi, Carlos Olarte, and Catuscia Palamidessi
• "Breaking the Sequential Dependency Bottleneck: Extracting Data Parallelism in the Presence of Serializing Data Dependencies", Narayan Ganesan, Roger Chamberlain, Jeremy Buhler, and Michela Taufer
• "Evaluation of Different Complexity Measures for Signal Detection in Genome Sequences", Mehdi Kargar, and Aijun An
• "A Bayesian Inference Approach for High Performance Genomics Information Retrieval", Vivian Hu, and Jimmy Huang
• "In Silico Identification of microRNAs from Expressed Sequence Tags of Three Earthworm Species", Ping Gong, Baohong Zhang, and Edward Perkins
• "Systematic Data Integration Platform for Functional Glycomics", Mahesh Visvanathan