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OneBioStore Poster Award

  • anchor: #20161109115220
  • head: OneBioStore Poster Award
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20161109115220
  • start: 2016-11-09
  • stop: 2017-03-09
  • text: The OneBioStore project, a collaboration between SCoRe and DIDC Lab of Tevfik Kosar has been recognized with the 2nd prize in the poster and live demo competition during the CSE Mixer event. The CSE Mier is a social event for local alumni to meet with CSE faculty, students and corporate partners.
  • author: J.Z.
  • tags:

IEEE TCPP

  • anchor: #20161103002939
  • head: IEEE TCPP
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20161103002939
  • start: 2016-11-03
  • stop: 2017-03-03
  • text: Jaric will be serving as the Student Travel Awards Chair for the IEEE Technical Committee on Parallel Processing (TCPP). TCPP has several functions including sponsoring professional meetings, bringing out publications, seting guidelines for educational programs and coordinating academia, funding agency, and industry activities in areas related to parallel and distributed processing.
  • author: J.Z.
  • tags:

SABNA paper accepted to IEEE BigData 2016

  • anchor: #20161011165052
  • head: SABNA paper accepted to IEEE BigData 2016
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20161011165052
  • start: 2016-10-11
  • stop: 2017-02-11
  • text: Our paper introducing SBNA and the optimal path extension technique has been accepted for the IEEE BigData 2016 conference. Congrats to Subhadeep who will be presenting in December. You can access the preprint from arXiv: https://arxiv.org/abs/1608.02682.
  • author: J.Z.
  • tags:

SABNA 1.0 is now vailable!

  • anchor: #20160810110456
  • head: SABNA 1.0 is now vailable!
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160810110456
  • start: 2016-08-10
  • stop: 2016-12-10
  • text: We are happy to announce the first release of SABNA – our software toolkit for exact Bayesian networks structure learning. The source code and documentation are available from https://gitlab.com/SCoRe-Group/SABNA-Release. The accompanying preprint describing the optimal path extension technique, which is at the core of SABNA, is available from arXiv: https://arxiv.org/abs/1608.02682. Enjoy!
  • author: J.Z.
  • tags:

SC16 Student Volunteers

  • anchor: #20160720225013
  • head: SCoRe SC16 Student Volunteers
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160720225013
  • start: 2016-07-20
  • stop: 2016-11-20
  • text: Ajay Deshpande, Subhadeep Karan and Frank Schoeneman have been accepted to the Supercomputing 2016 Student Volunteers program – congratulations! Student Volunteers play a key role in supporting the overall conference and conference attendees. Undergraduate and graduate student volunteers help with the administration of the conference and have the opportunity to participate in student-oriented activities, including professional development workshops, technical talks by famous researchers and industry leaders, exploring the exhibits and developing lasting peer connections.
  • author: J.Z.
  • tags:

ACM BigLS 2016 Travel Grants

  • anchor: #20160630141849
  • head: ACM BigLS 2016 Travel Grants
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160630141849
  • start: 2016-06-30
  • stop: 2016-10-30
  • text: Thanks to the support from the NSF, the ACM International Workshop on Big Data in Life Sciences (BigLS) offers travel grants for students and postdocs from US academic institutions! Application deadline August 5, 2016. More information can be found at http://www.bigls.org/
  • author: J.Z.
  • tags:

The Eric Pitman Summer Workshop

  • anchor: #20160629150527
  • head: The Eric Pitman Summer Workshop
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160629150527
  • start: 2016-06-29
  • stop: 2016-10-29
  • text: On June 29, Jaric gave a talk during the Eric Pitman Annual Summer Workshop in Computational Science organized by the Center for Computational Research at the University at Buffalo. The workshop strives to introduce students into the application of computer modeling and simulation to solve important problems in science and engineering. It is really a great experience for the participating high school students!
  • author: J.Z.
  • tags:

Frank Schoeneman accepted for GE Student Research Summit

  • anchor: #20160611125424
  • head: Frank Schoeneman accepted for GE Student Research Summit
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160611125424
  • start: 2016-06-11
  • stop: 2016-10-11
  • text: Frank Schoeneman has been selected to present his work on fluid-flow design during the 5th annual Student Research Summit at the GE Global Research site in Niskayuna, NY. The GE Student Research Summit is a one-day event hosting top graduate students in science and engineering. The goal is to provide students with the opportunity to network with other academic talent and accomplished professionals in an industrial research setting. The event features talks from several of GE technology experts as well as laboratory tours and networking opportunities. There is also a poster gallery session for which students prepare and present posters on their current research topics.
  • author: J.Z.
  • tags:

Vicky Zheng awarded GHC Scholarship

  • anchor: #20160602200625
  • head: Vicky Zheng awarded GHC Scholarship
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160602200625
  • start: 2016-06-02
  • stop: 2016-10-02
  • text: Vicky Zheng has been awarded a GHC Scholarship to attend the 2016 Grace Hopper Celebration of Women in Computing (GHC) in Houston, Texas, October 19-21, 2016. The scholarship is spearheaded by the Anita Borg Institute
 – “a social enterprise founded on the belief that women are vital to building technology that the world needs.
  • author: J.Z.
  • tags:

CSE Undergraduate Research Award

  • anchor: #20160503113717
  • head: CSE Undergraduate Research Award
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160503113717
  • start: 2016-05-03
  • stop: 2016-09-03
  • text: Paul Kowalski and Vicky Zheng have been recognized by the department with the CSE Undergraduate Research Award! “The award is for Paul Kowalski for research work on developing algorithms for constructing similarity graphs from massive DNA sequence data, and Vicky Zheng for research work on developing algorithms to identify a set of short protein sub-sequences for vaccine designs.
  • author: J.Z.
  • tags:

Ashish Tyagi awarded Michael Bauda Scholarship

  • anchor: #20160430000202
  • head: Ashish Tyagi awarded Michael Bauda Scholarship
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160430000202
  • start: 2016-04-30
  • stop: 2016-08-30
  • text: Ashish Tyagi has been awarded Michael Bauda Scholarship. “This scholarship was established by Dr. and Mrs. Charles A. Bauda to be used for a scholarship for a deserving student in the School of Engineering and Applied Sciences.”
  • author: J.Z.
  • tags:

AWS Cloud Credits for Research

  • anchor: #20160411233018
  • head: AWS Cloud Credits for Research
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160411233018
  • start: 2016-04-11
  • stop: 2016-08-11
  • text: We have been awarded $10,000 by Amazon in AWS cloud credits for research on cloud software for long reads analysis. This will enable us to test and prepare our Spark-based long-read analysis tools for Amazon cloud.
  • author: J.Z.
  • tags:

Biomedical Informatics Grand Rounds

  • anchor: #20160321122450
  • head: Biomedical Informatics Grand Rounds
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160321122450
  • start: 2016-03-21
  • stop: 2016-07-21
  • text: On March 23, 2016, Jaric will be presenting in the UB Biomedical Informatics Grand Round series. Title of the presentation: “Parallel Computing and Bioinformatics — Practitioner's Point of View”. The talk will be from 12-1pm in UB CTRC 5019A, 12-1pm.
  • author: J.Z.
  • tags:

Science and Art Cabaret 17.0

  • anchor: #20160211210323
  • head: Science and Art Cabaret 17.0
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20160211210323
  • start: 2016-02-11
  • stop: 2016-06-11
  • text: Jaric Zola will be talking about “Signal of Life: DNA and Computers” during the Science and Art Cabaret 17.0. “The Cabaret's home base is the Ninth Ward at Babeville in Buffalo, an intimate basement club where patrons can grab a drink at the bar and rub elbows with local artists and top university researchers in an interactive, informal setting. What makes the Cabaret unique is our mash-up of cutting-edge science and technology with art, music, poetry, and performance: we celebrate and explore creativity in all its forms, from the quantitative to the whimsical.” Read more at http://www.acsu.buffalo.edu/~whkinney/Cabaret/
  • author: J.Z.
  • tags:

HiCOMB 2016

  • anchor: #20150918092952
  • head: HiCOMB 2016
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150918092952
  • start: 2015-09-18
  • stop: 2020-09-18
  • text: HiCOMB 2016 call for papers has been posted. HiCOMB is arguably the oldest workshop devoted to applications of high performance and parallel computing in bioinformatics and computational biology.
  • author: J.Z.
  • tags:

Ajay Deshpande, new SCoRe member

  • anchor: #20150901224639
  • head: Ajay Deshpande, new SCoRe member
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150901224639
  • start: 2015-09-01
  • stop: 2020-09-01
  • text: Ajay Deshpande, M.Sc. student in the CSE department at UB joined the group. Ajay will be working on distributed workflows and storage management for genomic data.
  • author: J.Z.
  • tags:

Subhadeep Karan awarded travel grant for BigLS

  • anchor: #20150820201555
  • head: Subhadeep Karan awarded travel grant for BigLS
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150820201555
  • start: 2015-08-20
  • stop: 2020-08-20
  • text: Subhadeep Karan has been awarded a travel grant to attend the BigLS workshop. Subhadeep will present a poster on his work on using Bayesian networks for drug-protein interaction networks analysis.
  • author: J.Z.
  • tags:

pSALSA Workshop

  • anchor: #20150820201406
  • head: pSALSA Workshop
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150820201406
  • start: 2015-08-20
  • stop: 2015-12-20
  • text: Jaric Zola has been invited to present at the Workshop on Parallel Software Libraries for Sequence Analysis (pSALSA) collocated with the ACM BCB conference.
  • author: J.Z.
  • tags:

New interns at SCoRe

  • anchor: #20150820195534
  • head: New interns at SCoRe
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150820195534
  • start: 2015-08-20
  • stop: 2015-12-20
  • text: Vicky Zheng and Will Spoth joined SCoRe for research internship.
  • author: J.Z.
  • tags:

SC 2015 Bio Workshop

  • anchor: #20150716162759
  • head: SC 2015 Bio Workshop
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150716162759
  • start: 2015-07-16
  • stop: 2015-11-16
  • text: Jaric Zola is co-organizing a workshop on "Computational and Data Challenges in Genomic Sequencing" during the ACM/IEEE Supercomputing 2015. Supercomputing is arguably the most influential and important conference in HPC and parallel and distributed computing. The workshop will host some outstanding speakers, so check it out!
  • author: J.Z.
  • tags:

The Eric Pitman Annual Summer Workshop in Computational Science

  • anchor: #20150625095853
  • head: The Eric Pitman Annual Summer Workshop in Computational Science
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150625095853
  • start: 2015-06-25
  • stop: 2015-10-25
  • text: Jaric Zola will be giving a talk “Decoding DNA mysteries with Supercomputers” during the Eric Pitman Annual Summer Workshop in Computational Science organized by the Center for Computational Research at the University at Buffalo. The workshop is great K-12 outreach activity, so if you are in the area feel free to stop by! The talk will be at 11am on July 2 in the CCR building on Ellicott St.
  • author: J.Z.
  • tags:

New intern at SCoRe

  • anchor: #20150603192405
  • head: New intern at SCoRe
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150603192405
  • start: 2015-06-03
  • stop: 2015-10-03
  • text: Hannah Graesser, undergraduate student in Bioinformatics at the Canisius College, joined SCoRe for summer internship. Hannah will be working on methods for analyzing SNPs from genotyping arrays of related individuals.
  • author: J.Z.
  • tags:

Mayur Sakthivel joins SCoRe

  • anchor: #20150529125022
  • head: Mayur Sakthivel joins SCoRe
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150529125022
  • start: 2015-05-29
  • stop: 2015-09-29
  • text: Mayurapriyan Sakthivel, Ph.D. student at UB and Roswell Park Cancer Institute, joined SCoRe. He will be working on methods to analyze drug-protein interaction networks.
  • author: J.Z.
  • tags:

BigLS 2015

  • anchor: #20150430074528
  • head: BigLS 2015
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150430074528
  • start: 2015-04-30
  • stop: 2015-08-30
  • text: BigLS 2015 call for papers has been posted. BigLS is a workshop series dedicated to the broad theme of Big Data in life sciences. The goal of the workshop is to bring together leading researchers and practitioners working on a diverse range of Big Data problems relating to biology and medicine, and engage them in a discussion about current Big Data problems, the state of computational tools and analytics, the challenges and the future trends within life sciences. The workshop is co-organized by Jaric Zola.
  • author: J.Z.
  • tags:

Paul Kowalski joins SCoRe

  • anchor: #20150407093850
  • head: Paul Kowalski joins SCoRe
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150407093850
  • start: 2015-04-07
  • stop: 2015-08-07
  • text: Paul Kowalski, undergraduate student in the CSE department at UB joined SCoRe. Paul will be working on tools for profiling large-scale MPI applications.
  • author: J.Z.
  • tags:

CDS&E Days at UB

  • anchor: #20150317153555
  • head: CDS&E Days at UB
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150317153555
  • start: 2015-03-17
  • stop: 2015-07-17
  • text: The CDS&E program at University at Buffalo is organizing a five day event devoted to the latest advancements in Big Data and Big Computing. The even will feature six exciting keynote presentations and eight hands-on workshops. Mark your calendars for March 23-27. To learn more visit http://cdse.buffalo.edu/cdse-days.
  • author: J.Z.
  • tags:

News system

  • anchor: #20150317123858
  • head: News system
  • subtitle:
  • link: /score/dokuwiki/doku.php?id=news:allnewsdata#20150317123858
  • start: 2015-03-17
  • stop: 2015-07-17
  • text: We are just starting a small news system! Hopefully, it will be very active and informative, stay tuned!
  • author: J.Z.
  • tags:

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